David Dynerman

JOB TITLE: Morrey Visiting Assistant Professor

RESEARCH AREAS: Algebra, Applied Mathematics

RESEARCH INTERESTS:  Applied algebra, cryo-electron microscopy, implementation of algorithms

Publications

1. David Dynerman, Shamgar Gurevich, and Yoel Shkolnisky. A remark on detecting molecular symmetry from cryo-EM images. In preparation. 2014.
2. David Dynerman. Semi-algebraic Geometry of Common Lines. Research in the Mathematical Sciences, December 2014.
3. David Dynerman, Erick Butzlaff, and Julie C. Mitchell. CUSA and CUDE: GPU-Accelerated Methods for Estimating Solvent Accessible Surface Area and Desolvation. Journal of Computational Biology. 2009.

Software

1. FlowSym: A flowchart algorithm for detecting molecular symmetry from cryo-EM images. In preparation.
2. CUDESA: GPU accelerated code for calculating solvent accessible surface area and desolvation for protein-protein interfaces.  2008.